GWAS datasets.

For each of the case-control datasets analyzed in this study, the table lists its name, the disease considered, the number of X-linked SNPs (# SNPs), which include imputed SNPs, the number of genes tested in gene-based tests (# Genes), and the combined number of SNPs mapped to these genes or to within 15 kb of them (# SNPs in genic regions). The number of individuals (# Cases and # Controls) represents the number of samples following QC. The number of males and females in each category is denoted in parenthesis. All datasets consist of individuals of European ancestry.*As control individuals overlap across these datasets, we only considered non-overlapping control subsets for each of the datasets (Materials and Methods). The size of these subsets is indicated under # Controls.GWAS datasets.