Dog Brain ChromHMM chromatin state bed files
收藏NIAID Data Ecosystem2026-05-10 收录
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https://figshare.com/articles/dataset/Dog_Brain_ChromHMM_chromatin_state_bed_files/31971747
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资源简介:
This dataset contains ChromHMM bed file outputs for 8 distinct regions of the dog brain: Anterior cingulate gyrus (ACG), cerebellum, frontal lob, hypothalamus, occipital cortex, striatum, temporal cortex, and thalamus.
Inputs into ChromHMM were ATAC-seq peaks as well as histone peaks for H3K27me3, H3K4me3, and H3K27ac. The most informative ChromHMM model identified nine distinct chromatin states, numbered 1-9 in the bed files:
States 1, 4, 6: Promoters
States 2,8: Enhancers
State 3: Open chromatin (only ATAC signal)
State 7: No signal
State 9: Repressed
Data is on CanFam4 (UU_Cfam_GSD_1.0) coordinates
创建时间:
2026-04-09



