SupplementalFiles.zip

Supplemental Table S1: Details of the lncRNAs predicted form short reads RNA-seq data. Supplemental Table S2: Blast result of the five lncRNAs which were homologous with M. truncatula and Arabidopsis thaliana lncRNAs. Supplemental Table S3: homologies in the chloroplast genomes of Arabidopsis (AtC), rice (OsC), oats (AsC), M. truncatula (MtC) and alfalfa (MsC), respectively. Supplemental Table S4: homologies in the mitochondrial genomes of Arabidopsis (AtM), rice (OsM), M. truncatula (MtM). Supplemental Table S5: Details of the miRNA-lncRNA interaction network. Supplemental File S1：The source of data in Figure 4. Supplemental File S2: Sequences of sORF candidates predicted by ORFfinder. Supplemental File S3: Sequences of sORF candidates predicted by MiPepid.