Pantherophis alleghaniensis/obsoletus genome data from Burbrink et al. 2023

Data from Burbrink et al. 2023: Considering admixture when producing draft genomes: an example in North American ratsnakes (<em>P. alleghaniensis/P. obsoletus</em>). G3. <br> 1) GTF stats file for the whole genome AMNH R-178746: Pantherophis_alleghaniensis_obsoletus_.gtf.stats.txt <br> 2) GTF file for the whole genome AMNH R-178746: Pantherophis_alleghaniensis_obsoletus.gtf <br> 3) Scaffolds from 10X and truseq for P. alleghaniensis/P.obsoletus scaffolded (AMNH R-178746) to Thamnophis elegans: P_alleghaniensis_concatenate_ragtag.scaffolds.fasta <br> 4)GFF file for repeat elements from AMNH R-178746: ratsnake_all_repeats.gff.gz <br> 5) 20 UCE Diagnostic loci (fasta) for the P. alleghaniensis/P. obsoletus for the AMNH R-178746 whole genome sample and samples from Burbrink et al. (2021): Diagnostic_Loci.zip <br> 6) Whole genome for AMNH R-178746 uploaded to NCBI after their recommended processing: Pantherophis-obs-nodup-no_small_vector_gone.fa <br> 7) Whole genome for AMNH R-178746 prior to NCBI upload: Pantherophis-obs.fa <br> 8) Transcriptome assemblies from AMNH R-178746 for 13 organs and combined organs: ratsnake_transcriptome_assemblies.zip