Data underlying the publication: Mapping recombination landscape and basidial spore number in the button mushroom Agaricus bisporus
收藏4TU.ResearchData2021-06-25 更新2026-04-23 收录
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- Raw data of counts of basidial spore numbers in lamellae of 2 varieties of A. bisporus, i.e. var. bisporus and var. burnettii (parents).<br>The intervarietal hybrid and the intercross of haploid offspring of the intervarietal hybrid. These data sets are used to map QTL of the basidial spore number.<br>- A selection of 71 haploid offspring of HBT03 that was outcrossed with H39. This set was used to generate 40-50 haploid offspring that was subsequently genotyped to assess crossover positions.<br>These data were used to QTL map the trait " recombination landscape"<br>- Genotypes of the intervarietal hybrid HBT03 (var. bisporus H97 x var. burnettii H119p4).<br>180 homokaryotic single spore isolates (SSIs) were genotyped using 215 SNP's using Kasp genotyping method.<br>- 71 haploid offspring of the intervarietal hybrid HBT03 were outcrossed with the var. bisporis homokaryon H39.<br>From each hybrid, 40-50 haploid offspring was genotyped using 4 SNP markers per chromosome:<br>markers at the chromosome ends, and 2 markers 150-200 kb from chromosome ends ("border" marker).<br><br>
本数据集包含双孢蘑菇(Agaricus bisporus,缩写A. bisporus)两个变种的菌褶担孢子数量计数原始数据,两个变种分别为原变种var. bisporus与伯内特变种var. burnettii,二者为该实验的亲本。此外还包含种间杂交菌株及其单倍体后代的互交实验数据,上述数据集可用于开展担孢子数量性状的数量性状位点(Quantitative Trait Locus, QTL)定位分析。
- 选取由HBT03与H39互交获得的71株单倍体后代作为实验材料,该群体用于衍生40~50株单倍体后代,后续通过基因分型实验以评估染色体交换位点的位置。相关数据被用于开展"重组景观"性状的QTL定位分析。
- 种间杂交菌株HBT03的基因型数据,该菌株由双孢蘑菇原变种H97与伯内特变种H119p4杂交获得。采用Kasp基因分型技术(Kasp genotyping)对180株同核体单孢子分离株(Single Spore Isolates, SSIs)进行215个单核苷酸多态性(Single Nucleotide Polymorphism, SNP)位点的基因分型。
- 将种间杂交菌株HBT03的71株单倍体后代与双孢蘑菇原变种同核体菌株H39进行互交。针对每株杂交菌株,选取40~50株单倍体后代,利用每条染色体上的4个SNP标记完成基因分型:其中2个标记位于染色体末端,剩余2个标记距染色体末端150~200 kb,即"边界标记"。
提供机构:
Lavrijssen, Brian; Sonnenberg, Anton S.M.; Telgerd, Narges Sedaghat; Hendrickx, Patrick
创建时间:
2021-06-25



