North Pond time-series transcriptomics supplementary data
收藏NIAID Data Ecosystem2026-03-12 收录
下载链接：
https://figshare.com/articles/dataset/North_Pond_time-series_transcriptomics_supplementary_data/13096724
下载链接
链接失效反馈官方服务：
资源简介：
Supplementary Data includes the following:
Sequencing Stats: Sequence, quality filtering, and assembly data and accession numbers for metagenomes and metatranscriptomes.
MAG stats and taxonomy: Completeness, contamination, strain heterogeneity, and taxonomic identification of the 63 high-completion MAGs obtained by binning.
Metatranscriptome TPM: TranscriptsCounts per million reads (TCPM) of all annotated genes in each metatranscriptome.
KEGGDecoder: Completeness of all KEGG modules in all high-completion MAGs determined using Hidden Markov Models in KEGGDecoder within MetaSanity. Completeness of each enzymatic pathway is expressed as a percentage (0 to 100%).
MEROPS: Extracellular proteases annotated in all 64 high-completion bins using a Prokka search against the MEROPS database followed by analysis using PSortb and SignalP.
CAZy: Carbohydrate-active enzymes annotated in all 64 high-completion bins using a Prokka search against the CAZy database.
FeGenie: Genes related to iron acquisition, storage, and reduction/oxidation in each MAG, annotated using FeGenie.
创建时间：
2020-10-15
