Gemma

Gemma是一个基因表达数据库，收录并重新分析了数千个微阵列和RNA-seq实验的数据。该数据库提供实验设计注释、差异表达分析结果，并特别关注与神经系统相关的实验。Gemma由不列颠哥伦比亚大学Pavlidis实验室开发维护，现支持单细胞/单核数据，可通过R(gemma.R)和Python(gemmapy)软件包进行程序化访问。Gemma is a gene expression database that collects and reanalyzes data from thousands of microarray and RNA-seq experiments. It provides experimental design annotations and differential expression analysis results, with a particular focus on experiments related to the nervous system. Developed and maintained by the Pavlidis Lab at the University of British Columbia, Gemma currently supports single-cell/single-nucleus data, and can be accessed programmatically via the R package gemma.R and Python package gemmapy.

搜集汇总

背景与挑战

背景概述

Gemma是一个基因表达数据库，收录并重新分析了数千个微阵列和RNA-seq实验的数据，提供实验设计注释和差异表达分析结果，尤其专注于神经系统相关研究。该数据库由不列颠哥伦比亚大学Pavlidis实验室开发维护，现扩展支持单细胞/单核数据，并可通过R和Python软件包进行程序化访问。