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Input files for "High Conformational Flexibility of the E2F1/DP1/DNA complex"

NIAID Data Ecosystem2026-05-01 收录

DNA复合物

分子构象模拟

数据链接：

https://zenodo.org/record/4153158 数据链接链接失效反馈

官方服务：

资源简介：

The are the input files to generate the refined structure and conformational ensemble for our work on the E2F1/DP1/DNA complex

应用场景：

创建时间：

2024-04-12

DNA复合物

转录因子机制

SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA THAT IS TRANSLATIONALLY DISORDERED Descriptor: HEAT SHOCK FACTOR PROTEIN, HSE DNA-PH

Protein Data Bank Japan2024-11-20 更新50

Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold duplex (21mer) containing the cognate REPE54 sequence and an insert duplex (10mer) with guest TAMRA-labelled thymine and T-A rich sequence.

DNA复合物

生物纳米材料

Protein Data Bank Japan2024-05-01 更新30

Using Metadynamics to Reveal Extractant Conformational Free Energy Landscapes

分子构象模拟

化学分离计算

Input scripts for the simulations

Zenodo2023-11-14 更新20

E. coli DNA Gyrase - DNA binding and cleavage domain in State 1

DNA复合物

DNA拓扑异构酶

E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 Descriptor: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4

Protein Data Bank Japan2024-05-22 更新40

Human DNA polymerase epsilon bound to DNA and PCNA (closed conformation)

锥虫kDNA复制机制

DNA复合物

Human DNA polymerase epsilon bound to DNA and PCNA (closed conformation)

NIAID Data Ecosystem30