Protein Structure .pdb Files

NIAID Data Ecosystem2026-03-14 收录

蛋白质结构预测

免疫学建模

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https://figshare.com/articles/dataset/Protein_Structure_pdb_Files/22266847 数据链接链接失效反馈

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资源简介：

pdb files generated from amino acid sequences of blue whale TLR4 and yarkand deer TLR4. Done using Phyre2

创建时间：

2023-03-15

MassiveFold data for target T1266

蛋白质结构预测

生物信息学

MassiveFold data generated for CASP16, in collaboration with CAPRI . 8040 predictions were generated for the target = 1005 x 8 sets of parameters. - a description of the setup can be found in `Massive

DataCite Commons2025-05-14 更新60

Supplementary Figures and Code R markdown from Immunological feedback loops generate parasite persistence thresholds that explain variation in infection duration

寄生虫感染动力学

免疫学建模

R markdown file containing all code necessary to reproduce the results presented in the main text, as well as to produce supplemental figures.

The Royal Society Figshare2024-09-10 更新40

Prediction results for proteins with sequence identity less than 30%.

蛋白质结构预测

生物信息学

The prediction results for each of the proteins in S23 with maximum sequence identity less than 30% to any proteins in S497 are listed in this Table. The columns are defined as in Table 5. The ID% col

Figshare2015-12-02 更新30

Additional file 4: of Functional insights from proteome-wide structural modeling of Treponema pallidum subspecies pallidum, the causative agent of syphilis

蛋白质结构预测

梅毒病原体功能注释

Table S4. Comparison of T. pallidum primary and tertiary structure-based functional annotations using only the top-ranked Phyre2 model template for each protein comparison. (XLSX 33 kb)

NIAID Data Ecosystem40

PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).

蛋白质结构预测

分子相互作用

PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).

NIAID Data Ecosystem30