File S1 - Genome-Wide Transcriptome and Antioxidant Analyses on Gamma-Irradiated Phases of Deinococcus radiodurans R1

Table S1, List of primers used for real-time RT-PCR validation of RNA-seq based data. Table S2, The concentration of bacillithiol and cysteine. Table S3, The annotated carotenoids compounds list. Figure S1, Functional categories of significantly expressed genes at each time point. Figure S2, The significantly expressed genes mapped metabolic pathways in the D1 compared to DC group using iPATH2 online software. Figure S3, Representative inter-group correlation coefficients were calculated by the Spearman Rank-Order Correlation. Figure S4, The representative total ion chromatogram of LC-MS based metabolomics for D. radiodurans R1 cell. Figure S5, The positive ion MS/MS fragmentation of the lycopene from wild strains extracts (top panel) and the positive ion mode fragmentation spectrum for synthetic lycopene (bottom panel). (DOC)