Materials S1 - Simplified Method for Predicting a Functional Class of Proteins in Transcription Factor Complexes

Supplementary Table 1. Listing of used 171 amino acid indices. Supplementary Table 2. Description of the dataset used in this study. Supplementary Table 3. Summary of classes used to build models. Supplementary Table 4. Definitions of models. Supplementary Table 5. Performance of various classifiers using 171 features. Supplementary Table 6. Performance results of various classifiers used on 544 features. Supplementary Table 7. Performance results of various classifiers used on 171 features. Supplementary Table 8. Comparison of accuracies across various classifiers using 171 and 544 features. Supplementary Table 9. Effect of cross validation levels on various classifiers during model building stage. Supplementary Table 10. Effect of percentage split levels on various classifiers during model building stage. Supplementary Table 11. Comparative results between domains, AAI and AAI+domains with 10-fold cross-validation.
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