scIBD Website Data

Data files used in scIBD (www.scibd.cn) is also available here.Gene expression matrixIntegrated gene expression matrix of scIBD (Anndata object in H5AD format) (scIBD.gex_matrix.h5ad and the raw count matrix scIBD.gex_matrix_raw.h5ad.zip, scIBD.gex_matrix_raw.rds)Integrated gene expression matrix of scIBD (Seurat object in RDS format) (scIBD.gex_matrix.rds)Meta data of scIBD (scIBD_sample_meta_data.txt.gz)Differential expressed genesDifferential expressed genes across cell subtypes within each major cluster (scIBD.deg_by_major_cluster.rds)Differential activated regulonsDifferential regulons between healthy and disease in each major cluster (scIBD.diff_regulon_by_major_cluster.rds)