five

Yeast 18S rRNA DMS RNA structure probing ChemModSeq data

收藏
DataCite Commons2023-04-27 更新2025-04-17 收录
下载链接:
https://datashare.ed.ac.uk/handle/10283/2914
下载链接
链接失效反馈
官方服务:
资源简介:
These fasta files were generated from fastq files from the Hector et al NAR 2014 ChemModSeq paper ( https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gku815 ). Included are biological triplicates of 18S DMS RNA structure probing data. The data were generated using the ChemModSeq pipeline (https://bitbucket.org/sgrann/chemmodseqpipeline). The reads from the raw fastq files were trimmed using FlexBar to remove adapters and low quality nucleotides. The sequence information present in the in-read random barcodes was used to remove PCR duplicates. Thus the data in the fasta files represent unique cDNAs. The first nucleotide in the forward (_1) read data is the reverse transcriptase drop-off point.
提供机构:
University of Edinburgh. School of Biological Sciences
创建时间:
2017-10-05
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作