mRNA and DNAm references for kidney
收藏DataCite Commons2021-11-04 更新2024-07-28 收录
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https://figshare.com/articles/dataset/mRNA_and_DNAm_references_for_kidney/14399483/1
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资源简介:
The data contains a 289-marker expression reference and a 55-marker DNAm reference for Kidney, which can be used to estimate cell type fractions of collecting duct cells, endothelial cells, fibroblasts, immune cells, loop of henle cells and proximal tubule cells in Kidney tissue with EpiSCORE framework.<br>Kidney_Expref.csvA scRNAseq expression reference for Kidney. Each row is a marker gene (in gene symbol) and each column is a cell type. For each marker gene, the value of the reference matrix is the median expression level for each type of cells in scRNAseq data.<br>Kidney_Mref.csvA DNAm reference for Kidney. Each row is a marker gene (in entrezID) and each column is a cell type. The last column is the weight for each marker. The value of the matrix is the imputed DNAm level from expression reference.
提供机构:
figshare
创建时间:
2021-04-13



