SEM_dataset.csv

This repository contains R code and data for our manuscript (submitted):"<b>Hidden zoonotic risk: immunogenetic-pathogen networks shrink in a generalist rodent inhabiting disturbed landscapes</b>"by Ramona Fleischer, Georg Joachim Eibner, Nina Isabell Schwensow, Sofia Paraskevopoulou, Gerd Mayer, Victor Max Corman, Christian Drosten, Kerstin Wilhelm, Alexander Christoph Heni, Simone Sommer and Dominik Werner SchmidIn this work we examined the effect of anthropogenic disturbance at the landscape level on neutral genetic diversity and diversity at the important immune gene region of the Major Histocompatibility Complex class II and multiple pathogen infections in a common neotropical rodent generalist, the Tomey's spiny rat (<i>Proechimys semispinosus</i>).<br>The file SEM_dataset.csv contains meta information about the sampled individuals and were used to run the analyses in R.