Analysis of correlation between SNP genotypes and transcript expression in un-stimulated ex vivo whole blood cultures (ΔCt) or after M. leprae sonicate stimulation (ΔΔCt).

*LD: Linkage disequilibrium; singleton SNPs (sSNP) and correlated SNPs (BIN 1, BIN 2 and BIN 3) are indicated.**Regression coefficients under dominant major allele model.***P-values for significance of correlation between genotypes and transcript levels under a dominant major allele model employing a likelihood ratio test (LRT); significant correlations are in bold and underlined.