SNP distribution Elite controllers vs controls

SNP distribution Elite controllers vs controlsIn this study, we compared 543 European Elite Controllers from the International Collaboration on HIV-1 Genomics (ICGH) to and 3,272 controls individuals. This involved a meta-analysis of two case-control comparisons, leading to the identification of 2,626 significant SNPs (pFor more information contact the coordinators of the project :Paul Mclaren: [e-mail]-François Zagury: [e-mail] of the data and file structureGenotypic data was generated using three genotyping arrays: Illumina 550, Illumina 650, and Illumina 1M. Prior to analysis, we conducted standard quality control (QC) procedures to ensure the use of clean data. We then could impute an analyse 35,552 SNPs in the MHC region.