Viral contigs identified from secondary chlorophyll maximum hybrid assembly
收藏Figshare2025-06-03 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Viral_contigs_identified_from_secondary_chlorophyll_maximum_hybrid_assembly/29067950/1
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A hybrid assembly was made from both long and short read sequencing from a secondary chlorophyll maximum in the Eastern Tropical North Pacific. Viral sequences were identified by 3 different software algorithms: VirSorter2, VIBRANT, and geNomad. Any contig that was identified as viral by at least 2 of the 3 software choices was determined to be viral. Sequences here include only those that were at least 10 kb in length. <br>Included files are the list of contig names (2024_hybrid_2of3_10k_withvg_list.txt), the metadata table with various geNomad, VIBRANT, and checkV outputs (2024_hybrid_2of3_10k_withvg_meta.txt) and the nucleotide sequences of each of the viral contigs (2024_hybrid_2of3_10k_withvg.fna)
提供机构:
Rathwell, Christina; Rocap, Gabrielle; Fuchsman, Clara
创建时间:
2025-06-03



