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TBI RNAseq data tables

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Figshare2025-01-29 更新2026-04-28 收录
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https://figshare.com/articles/dataset/TBI_RNAseq_data_tables/28303880
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A description of each tab of the file is below-Stats- Each sample and the aggregated data from all other tabs. At the bottom are statistical values for each comparison.Gencode45- The transcripts per million matrix from Salmon alignment for each sample and every transcript.Sig Transcripts- The list of all transcripts that had statistical significance in each of the four comparisons (A-D). STRING-based- STRING-based gene ontology enrichment terms for the sig transcripts in the four comparisons.CIBERSORTx- Normalized abundance values for each cell type deconvolution of each sample.KRAKEN2_level- The number of reads in each sample that align uniquely to each species annotation. In brackets on the number of paired-end reads that align, such that a 1 only one end of alignment returned reads and a 2 both ends had alignments to the species.MIXCR- The unique amino acid sequences of each chain and the times the sequence is detected in each sample.Heatmap- The raw values used to generate the heatmap within the paper.
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2025-01-29
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