RNA sequencing data of mouse intestinal epithelial cells following different dietary treatments and Trichuris muris infection. RNA sequencing data of mouse intestinal epithelial cells following different dietary treatments and Trichuris muris infection

Mice were fed either a synthetic control diet or an inulin-enriched diet for 14 days prior to infection. Half of the mice in each dietary group were infected with 300 T. muris eggs, and euthanised 72 hours post-infection. Overall design: Mice (n=5 per group) were rnadomly allocated to groups. Diets were fed ad libitum. IEC were isolated from colon tissue using EDTA digestion.