Long-range chromosome interactions mediated by cohesin shape circadian gene expression

ChEBI2016-04-04 更新2026-07-12 收录

染色质相互作用

生物钟基因调控

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-68832 数据链接链接失效反馈

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Long-range chromosome interactions mediated by cohesin shape circadian gene expression

创建时间：

2016-04-04

Additional file 1 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C

基因组学

染色质相互作用

Additional file 1: Table S1. Datasets used in this study. (A) data availability (B) QC statistics of Micro-C, Hi-C, and promoter capture Micro-C data (C) Additional metrics of promoter capture Micro-C

DataCite Commons2023-04-13 更新100

In Situ Chromatin Interaction Analysis Using Paired‐End Tag Sequencing

染色质相互作用

转录调控

In situ ChIA-PET, fastq files for testing bioinformatic pipeline. Library ID: LDK0004-L Sequencing platform: Miseq-2X150bp Cell line: KC167 IP-factor: RNAPII Reference genome, as a suggestio

NIAID Data Ecosystem60

Additional file 3: of Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells

染色质相互作用

乳腺癌研究

A table listing the gene ontology terms of the MCF-7 up-regulated genes that are on small chromosomes and are on compartment switch regions. (XLSX 5 kb)

DataCite Commons2024-12-18 更新20

Additional file 7 of Human transcriptional interactome of chromatin contribute to gene co-expression

基因共表达

染色质相互作用

Additional file 7:Co-expressed gene pairs have more Hi-C interactions than all pairs. T tests are used to test the difference between Hi-C interactions of co-expressed gene pairs and all pairs. In co-

DataCite Commons2024-02-16 更新70

Genome-wide maps of nuclear lamina interactions in AML12 cells.

染色质相互作用

核纤层蛋白功能

We have used microarrays to identify LaminB1 occupancy signal in AML12 cell using the DamID protocol. We have performed DamID-chip on AML12 cell with four biological replicates.

NIAID Data Ecosystem40

Long-range chromosome interactions mediated by cohesin shape circadian gene expression

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