Additional file 4: Performance comparison of KDeep against other RBP-site predictors on the RBP-24 dataset. The evaluation includes DeepRKE-, DeepRKE+, GraphProt, deepnet-rbp, DeepBind, mmCNN, and iDe

DataCite Commons2024-08-15 更新40

Enhanced CLIP-Seq (eCLIP-Seq) of PXR in different cell types

RNA结合蛋白

PXR转录后调控

eCLIP-seq identified PXR as an RNA-binding protein to interact with mature mRNA while at its âinactivatedâ form in cell cytoplasm. Overall design: Enhanced UV crosslinking and immunoprecipitation

NIAID Data Ecosystem30

Global identification of RsmA/N binding sites in Pseudomonas aeruginosa by in vivo UV CLIP-seq

RNA结合蛋白

基因表达调控

Pseudomonas aeruginosa harbours two redundant RNA-binding proteins RsmA/RsmN (RsmA/N), which play a critical role in balancing acute and chronic infections. However, in vivo binding site

DataCite Commons2022-08-03 更新60

Structural Investigation of hnRNP L bound to RNA

RNA结合蛋白

蛋白质-RNA相互作用

Structural Investigation of hnRNP L bound to RNA Descriptor: Protein Hnrnpl, RNA (5'-R(*CP*AP*CP*AP*CP*A)-3') Authors: Blatter, M, Allain, F. Deposit date: 2014-06-24 Release date: 2015-12-23 Last mod

Protein Data Bank Japan2024-05-01 更新30