SyntenyMapper - 25 species pairs
收藏DataCite Commons2020-09-04 更新2024-07-25 收录
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https://figshare.com/articles/dataset/SyntenyMapper_25_species_pairs/1192659/1
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资源简介：
This data represents SyntenyMapper results for 25 species pairs, including input data from ENSEMBL Compara, SyntenyMapper output and, for some species, visualization. SyntenyMapper is a tool for highly accurate detection of micro-rearranged regions within macro-rearranged synteny regions. For each species pair, four files are present:<br>species1-species2-orthologs-v73.filtered: ENSEMBL Compara orthology relationships for protein-coding genes species1-species2-synteny-v73: ENSEMBL Compara synteny regions species1-species2-output_synteny-v73: SyntenyMapper output, refined synteny regions including micro-rearrangements species1-species2-output_mapping-v73: SyntenyMapper output, one-to-one mapping of orthologous genes, including reference to refined synteny regions (optional) species1-species2-visualization.tar: SyntenyMapper visualization of all synteny regions for the species pair, as html files with clickable gene labels and png files. All ENSEMBL data is downloaded from version 73.
提供机构：
figshare
创建时间：
2016-01-19
