five

SNPs affecting predicted exonic splicing enhancers (ESEs).

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https://figshare.com/articles/dataset/_SNPs_affecting_predicted_exonic_splicing_enhancers_ESEs_/543238
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Note: The relative splice-site usage disagrees with expectations for the last 3 cases. 1See Figure 2. Cases marked C/D are cases where the SNP is very close to the middle of the exon. 2Bold font indicates the SNP position. 3Score calculated using ESE Finder 3.0 online tool [16]. 4Averaged PLIER-summarized expression score for each homozygous genotype. 5Ancestral genotype, as inferred from the chimpanzee genome. 6SF2/ASF (IgM-BRCA1) [51]. 7Cases for which an inverse correlation between splicing efficiency and probeset expression is expected based on the two isoform structures and the position of the affected splice-site, as shown in Figure 2.
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2009-12-11
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