ProPan

ProPan is a comprehensive prokaryotic pan-genome database toward understanding genomic dynamics. It covered 1,504 species across archaea and bacteria (including 51,882 strain genomes), by which, multiple analyses were processed: species orthologous gene clustering and pan-genome profile, gene cluster nucleotide diversity calculation, species metabolism circle, multiple function annotation and etc. Taken together, ProPan is devoted to accelerate various prokaryotic species research via post-processed dataset storing, multiple-dimensional analyses, and instant visualizations from pan-genomics.ProPan是一款面向基因组动态解析的综合性原核泛基因组数据库。该数据库涵盖古菌与细菌共计1504个物种（含51882株菌株基因组），并基于此开展了多项分析：包括物种直系同源基因聚类与泛基因组图谱分析、基因簇核苷酸多样性计算、物种代谢循环分析及多维度功能注释等。综上，ProPan旨在通过存储后处理数据集、提供多维度分析与泛基因组学相关的即时可视化功能，加速各类原核物种的相关研究。

搜集汇总

背景与挑战

背景概述

ProPan是一个全面的原核生物泛基因组数据库，覆盖了1504个古菌和细菌物种（包含51882个菌株基因组）。该数据库通过正交基因聚类、核苷酸多样性计算、代谢圈分析等多维分析，旨在加速原核物种研究，并提供处理后数据集存储与即时可视化功能。