C2_1clock - MrBayes file
收藏DataONE2016-09-13 更新2024-06-26 收录
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资源简介：
File_C2 (plain text). MrBayes executable file for a total-evidence dating analysis of all 86 taxa in the matrix in [6], using a single relaxed (independent gamma rates) clock for all traits (morphological and molecular). The sampled ancestor birth-death tree prior [17], and the Markov model of morphological evolution [18,19], were used. Optimal substitution models and substitution-model-partitions were found with PartitionFinder for molecular data (see C1) and with stepping-stone analysis in MrBayes for morphological data as implemented in [10]. Numerous (>20) MCMC runs were initially performed for 5 million generations to investigate tuning, mixing and convergence. The final analysis was then performed with 4 runs of 20 million generations, with the first 30% of samples discarded as burnin.
创建时间：
2016-09-13
