Genome-enabled analysis of population dynamics and virulence associated loci in the oat crown rust fungus Puccinia coronata f. sp. avenae

These are VCF files that represent genomic variation of 182 to 217 Puccinia coronata f. sp. avenae isolates from the US against three genome references. Raw Illumina sequencing reads of 162 US and South African isolates used in this study are available in the NCBI BioProject PRJNA660269. Reads of 62 US isolates used in this study generated by Miller et al., (2020 - https://doi.org/10.25919/k0ze-ya06) are available in the NCBI BioProject PRJNA398546.