Prostate_cancer_cross-platform_results

Cross-platform integrative analysis results from biological comparisons performed between various prostate cancer stages presented in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study. Data were integrated using our integrative pipeline available at https://github.com/JMarzec/transcriptomics_data_integration.
Biological comparison:TvsN - results from Primary tumour (T) versus Benign prostate (N) comparisonHvsN - results from HGPIN (T) versus Benign prostate (N) comparisonTvsH - results from Primary tumour (T) versus HGPIN (H) comparisonTmvsT - results from Metastatic primary tumour (Tm) versus Primary tumour (T) comparisonMvsT - results from Metastasis (M) versus Primary tumour (T) comparison

Results description:
ensembl_id - Ensembl gene ID
hgnc_symbol - HGNC gene symbol
description - HGNC gene name
chromosome_name - gene chromosomal location (chromosome name)
band - gene chromosomal location (chromosome band)
strand - gene chromosomal location (chromosome strand)
start_position - gene start location (base pair position)
end_position - gene end location (base pair position)
rank_[biological_comparison] - data integration-based gene ranking in individual biological comparisons
rank_[biological_comparison]_percentile - data integration-based gene ranking (percentile) in individual biological comparisons
average_log2fc_[biological_comparison] - expression fold-changes (in log2 scale) observed in individual biological comparisons
combined_p_[biological_comparison] - combined P-values observed in individual biological comparisons