The primary objective of this study was to create a genome-wide high resolution map (i.e., >100 bp) of ‘rearrangement hotspots’ which can facilitate the identification of regions capable of mediating
SV detection at Gpr143 and Htr2b gene loci using Sniffles2. Sniffles analysis was performed for our assembly and Ensembl assembly using PacBio raw reads. Gene IDs were assigned by BRAKER3 for our asse
Additional file 9. Elena (EL) repeat alignment. The numbers following the respective repeat names indicate the repeat ordinal position in the IGS; the numbers following after a space (I, II, III)â the
