遇见数据集

Meloidogyne genus OrthoFinder analysis

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Recherche Data Gouv France2024-01-01 更新2026-04-09 收录
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OrthoFinder 2.5.4 analysis of the predicted proteomes of M. incognita, M. luci, M. javanica, M. arenaria, M. hapla, M. chitwoodii and M. graminicola as well as those of the cyst nematodes Heterodera schachtii and H. glycines as outgroup species. OrthoFinder was run with the option MSA for construction of a multiple sequence alignment with MAFFT and phylogenetic trees with FastTree. OrthoFinder identified 2980 low-copy number and highly conserved orthogroups for the reconstruction of the species tree.

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2024-01-01
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