Within-host diversity improves phylogenetic reconstruction of SARS-CoV-2 outbreaks

NIAID Data Ecosystem2026-05-02 收录

基因组流行病学

院内感染溯源

数据链接：

https://www.ncbi.nlm.nih.gov/sra/ERP138011 数据链接链接失效反馈

官方服务：

资源简介：

Illumina whole-genome sequencing of SARS-CoV-2 outbreaks within North London hospitals.

创建时间：

2025-03-22

The introduction and establishment of fluoroquinolone resistant Shigella sonnei into Bhutan

细菌鉴定

基因组流行病学

Supplementary table as published in Microbial Genomics in the following article: 'The introduction and establishment of fluoroquinolone resistant Shigella sonnei into Bhutan' [DOI:10.1099/mgen.0.00004

Figshare2015-11-24 更新40

Chromosomal integration and plasmid fusion occurring in ST20 carbapenem-resistant Klebsiella pneumoniae isolates coharboring blaNDM-1 and blaIMP-4 induce resistance transmission and fitness variation

细菌耐药性机制

基因组流行病学

To investigate the epidemiology of ST20 carbapenem-resistant Klebsiella pneumoniae (CRKP) in China, and further explore the genomic characteristics of blaIMP-4 and blaNDM-1 coharboring isolates and pl

Figshare2024-04-08 更新20

Candida spp. Umbrella BioProject

病原微生物基因组学

基因组流行病学

Whole genome sequencing (WGS) datasets from clinical and environmental Candida spp. (non-auris) isolates, applicable for genomic epidemiology.

NIAID Data Ecosystem20

Table_5_Global Scale Dissemination of ST93: A Divergent Staphylococcus aureus Epidemic Lineage That Has Recently Emerged From Remote Northern Australia.XLSX

基因组流行病学

抗生素耐药性传播

Background: In Australia, community-associated methicillin-resistant Staphylococcus aureus (MRSA) lineage sequence type (ST) 93 has rapidly risen to dominance since being described in the early 1990s.

NIAID Data Ecosystem30

Additional file 2 of Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients

抗菌药耐药性

基因组流行病学

Additional file 2: Supplementary Table 1. Specimen and genotype information of isolates included in this study.

Figshare2021-07-14 更新20