Gene sets that are differentially expressed (T-ALL versus AML cancer) using Gene Expression Omnibus Accession GSE36133 using a False Discovery Rate of 3 × 10−20.

Individual genes within each set can be found at software.broadinstitute.org/gsea/msigdb [2]. Individual gene p-values are computed with the Wilcoxon rank-sum test. Description of gene sets in Table 9 from Subramanian et al. [2]. 1. “Genes encoding cell cycle related targets of E2F transcription factors” 2. “Genes involved in the G2/M checkpoint, as in progression through the cell division cycle” 3.“Genes important for mitotic spindle assembly” 4. “Genes involved in DNA Replication” 5. “Genes involved in Mitotic M-M/G1 phases” 6. “Genes up-regulated during transplant rejection.” 7. “Genes encoding components of the complement system, which is part of the innate immune system” 8. “Genes involved in Signalling by NGF (nerve growth factor)” 9. “Genes up-regulated by STAT5 in response to IL2 (Interleukin 2) stimulation” 10. “Genes regulated by NF-kB in response to TNF (Tumor Necrosis Factor) [GeneID = 7124]” 11. “Genes mediating programmed cell death (apoptosis) by activation of caspases”.