Additional file 11: of Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing

Phylum (T7.1), class (T7.2) and genus (T7.3) level classification of caecal microbiome of chicken breeds/lines using Primer pair P2. Taxonomy was assigned using MG-RAST and subsequently analysed using STAMP where Benjamini-Hochberg test was used for multiple sample correction. Abundance was expressed in terms of % mean relative frequency. (XLSX 15 kb)