Proteins and sequences from the MicrobesOnline database

This figshare includes scaffold sequences, genes, and protein sequences from MicrobesOnline, a database of (mostly) bacterial and archaeal genomes. The data is provided as a sqlite3 database (gzipped). The tables included are: Taxonomy -- 1 row per genome Scaffold -- scaffolds for each genome ScaffoldSeq -- sequences for each scaffold. (Sequences for Arabidopsis thaliana chromosomes were omitted due to their length.) Locus -- genes for each scaffold Position -- positions of genes on scaffolds AASeq -- protein sequences Synonym -- gene names Description -- gene descriptions TaxParentChild -- parent-child relationships between taxonomic groups These are a subset of all the tables in MicrobesOnline. More detailed documentation is available of MicrobesOnline's schema is available at http://www.microbesonline.org/programmers.html