Host removal database: Homo sapiens, Sars-Cov-2, PhiX174
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下载链接：
https://zenodo.org/record/7044071
下载链接
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资源简介：
💾 cleanup-db
Kraken2 database, built upon a viral sequence masked human reference from:
Handley, Scott A. (2020). Virus+ Sequence Masked Human Reference Genome (hg19) (1.0) [Data set]. Zenodo. [10.5281/zenodo.4116107]
but separating chromosomes as artificial taxa to allow for QC, and includes Sars-Cov-2 and PhiX 174
💾 gutcheck-db
A very small DB containg some common gut bacteria and Human and Murine mitochondrial genome:
Akkermansia muciniphila
Bacteroides fragilis
Bifidobacterium longum
Blautia obeum strain
Escherichia coli
Enterococcus faecium
Prevotella copri
See: https://github.com/telatin/cleanup
创建时间：
2022-09-05
