Identification of founder sequences from EPD-PCR and bulk-PCR clone sequence alignments.

All EPD-PCR haplotypes are presented, while only those haplotypes getting OP values above the minimum value are shown for bulk-PCR clone sequences. Assumed founder sequences are highlighted in bold. # origin of sequences refer to the bulk-PCR products from which they originate (e.g., if haplotype a appeared two times in PCR product B and once in PCR product C, then 2×B and 1×C will appear in this column) * individuals for which statistical parsimony analyses produced two separated networks; here the sum of all OPs will be greater than one as OPs will be calculated independently for each network.