Additional file 1 of Integrating host transcriptomic signatures for distinguishing autoimmune encephalitis in cerebrospinal fluid by metagenomic sequencing

Additional file 1: Table S1. Differentially expressed host genes in IE versus AE. Table S2. Differentially expressed genes for functional enrichment analysis. Table S3. Functional enrichment analysis of DEGs and the enriched terms. Table S4. Differentially abundant microbes (at genus level) in IE versus AE. Table S5. Correlations of differentially expressed genes involved in neutrophil degranulation or synaptic transmission and signaling with CSF microbes in IE patients. Table S6. Correlations of differentially expressed genes involved in neutrophil degranulation or synaptic transmission and signaling with CSF microbes in AE patients.