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Cancer Genomics Hub

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re3data.org2024-05-31 收录
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https://www.re3data.org/repository/r3d100011174
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The Cancer Genomics Hub mission is now completed. The Cancer Genomics Hub was established in August 2011 to provide a repository to The Cancer Genome Atlas, the childhood cancer initiative Therapeutically Applicable Research to Generate Effective Treatments and the Cancer Genome Characterization Initiative. CGHub rapidly grew to be the largest database of cancer genomes in the world, storing more than 2.5 petabytes of data and serving downloads of nearly 3 petabytes per month. As the central repository for the foundational genome files, CGHub streamlined team science efforts as data became as easy to obtain as downloading from a hard drive. The convenient access to Big Data, and the collaborations that CGHub made possible, are now essential to cancer research. That work continues at the NCI's Genomic Data Commons. All files previously stored at CGHub can be found there. The Website for the Genomic Data Commons is here: https://gdc.nci.nih.gov/ The Cancer Genomics Hub (CGHub) is a secure repository for storing, cataloging, and accessing cancer genome sequences, alignments, and mutation information from the Cancer Genome Atlas (TCGA) consortium and related projects. Access to CGHub Data: All researchers using CGHub must meet the access and use criteria established by the National Institutes of Health (NIH) to ensure the privacy, security, and integrity of participant data. CGHub also hosts some publicly available data, in particular data from the Cancer Cell Line Encyclopedia. All metadata is publicly available and the catalog of metadata and associated BAMs can be explored using the CGHub Data Browser.

癌症基因组学中心(CGHub)的使命现已圆满完成。该中心成立于2011年8月,旨在为癌症基因组图谱、儿童癌症治疗性研究以生成有效治疗方案以及癌症基因组特征化计划提供一个数据存储库。CGHub迅速发展成为世界上最大的癌症基因组数据库,存储超过2.5拍字节的数据,并每月提供近3拍字节的数据下载服务。作为基础基因组文件的中央存储库,CGHub简化了团队科学研究的努力,使得数据的获取变得如同从硬盘下载一般便捷。便捷地访问大数据,以及CGHub促成的合作,现已成为癌症研究的关键。相关工作在国立癌症研究所(NCI)的基因组数据共享中心继续进行。所有之前存储在CGHub的文件均可在此找到。基因组数据共享中心的网站如下:https://gdc.nci.nih.gov/。癌症基因组学中心(CGHub)是一个安全的数据存储库,用于存储、编目和访问来自癌症基因组图谱(TCGA)联盟和相关项目的癌症基因组序列、比对和突变信息。CGHub数据的访问:所有使用CGHub的研究人员必须满足美国国立卫生研究院(NIH)制定的访问和使用标准,以确保参与者数据的隐私、安全和完整性。CGHub还托管一些公开可用的数据,特别是来自癌症细胞系百科全书的数据。所有元数据均公开可用,且元数据目录及其关联的BAM文件可通过CGHub数据浏览器进行探索。
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