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UHGG v2 reference for LocalHGT

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NIAID Data Ecosystem2026-05-01 收录
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https://zenodo.org/record/10959928
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资源简介:
Genome reference for HGT analysis in human gut microbiome, specifically for LocalHGT with UHGG v2.0.2.   Usage: 1. Please download the file UHGG_v2.0.2_representative.fasta.gz and unzip it by gzip -d UHGG_v2.0.2_representative.fasta.gz After that, pass the full path of the file "UHGG_v2.0.2_representative.fasta" to LocalHGT by localhgt bkp -r /path-to/UHGG_v2.0.2_representative.fastaor  localhgt event -r /path-to/UHGG_v2.0.2_representative.fasta 2. UHGG_v2.0.2_representative.fasta.fai is the index file, you can download it or not. If you download it, you should put it in the same folder as UHGG_v2.0.2_representative.fasta.If you don't download it, LocalHGT will generate it automatically.   Detailed instructions can be seen at LocalHGT.
创建时间:
2024-04-15
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