Guanica Dry Forest Soil Metagenome Raw sequence reads
收藏agdatacommons.nal.usda.gov2024-11-23 更新2025-03-23 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Guanica_Dry_Forest_Soil_Metagenome_Raw_sequence_reads/25085957/1
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To describe the taxonomic diversity and functional profiles of Guanica dry forest, metagenomic DNA was extracted from a metagenomic library generated from forest soil. The DNA was shotgun-sequenced using Illumina and analyzed using the MG-RAST server. The profiles can be used in comparative studies involving soils from high temperature and low humidity environments. Additionally, the functional profile can be used for bioprospecting studies with applications in biomedical sciences, biotechnology and microbial, population and applied ecology fields.
为描绘关尼卡干燥森林的物种多样性和功能特征,研究者从森林土壤中提取了宏基因组DNA,并以此构建了宏基因组文库。随后,采用Illumina平台对DNA进行鸟枪法测序,并通过MG-RAST服务器进行数据分析。所得的功能特征图谱可用于比较研究,涉及高温低湿环境中的土壤。此外,该功能图谱亦可用于生物勘探研究,其在生物医药科学、生物技术以及微生物、种群与应用生态学领域具有潜在应用价值。
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