Homologous membrane protein structures (HOMEP) version 1
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Table 1 = List of membrane protein structures in the HOMEP data set (version 1).
From Forrest, Tang & Honig 2006 Biophysical Journal (Supplementary Table 1)
https://www.ncbi.nlm.nih.gov/pubmed/16648166
Contains the following columns:
PDB-Code Protein-Name Source Res-(Å) Length (Num-TM) Number-of-TM-domains Family
Table 2 = List of pairs of membrane protein structures in the HOMEP data set (version 1).
From Forrest, Tang & Honig 2006 Biophysical Journal (Supplementary Table 2)
Contains the following columns:
Model Family Query Template ID(%) RMS(Å) GDT_TS(%) TM-ID(%) TM-RMS(Å) TM GDT_TS(%)
Table 3 = Manually-defined transmembrane regions in the HOMEP data set (version 1), listed for each family by transmembrane segment number. From Forrest, Tang & Honig 2006 Biophysical Journal (Supplementary Table 3).
Contains the columns defined as follows:
Protein chain identifier, start (-s) and end (-e) residues for each PDB structure in the family
创建时间:
2020-01-21



