Additional file 1 of SINE-derived satellites in scaled reptiles

Additional file 1 Multiple alignment of consensus sequences of sSat3 repeat units in snakes. The Squam3 consensus sequence is given above. Subscript indices indicate the following species. Pgu, Pantherophis guttatus; Lco, Laticauda colubrina; Pob, Pantherophis obsoletus; Ael, Arizona elegans; Pte, Pseudonaja textilis; Cho, Crotalus horridus; Cvi, Crotalus viridis viridis; Pfl, Protobothrops flavoviridis; Prm, Protobothrops mucrosquamatus; Vbe, Vipera berus; Pmuc, Ptyas mucosa; Dpu, Diadophis punctatus; Tel, Thamnophis elegans; Tsi, Thamnophis sirtalis; Hcy, Hydrophis cyanocinctus; Hha, Hydrophis hardwickii; Hme, Hydrophis melanocephalus; Nna, Naja naja; Oha, Ophiophagus hannah; Mth, Myanophis thanlyinensis; Tba, Thermophis baileyi; Eij, Emydocephalus ijimae; Lla, Laticauda laticaudata; Nsc, Notechis scutatus; Cpy, Crotalus pyrrhus; Bco1 and Bco2, Boa constrictor; and Cbo, Charina bottae. The snake families are colored: Colubridae, yellow; Elapidae, green; Viperidae, blue; Boidae, red; and Homalopsidae, magenta.