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MSA teleost PXR sequences, based on LBD

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Figshare2018-05-16 更新2026-04-29 收录
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https://figshare.com/articles/dataset/MSA_teleost_PXR_sequences_based_on_LBD/6204920
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Based on their ligand binding domains, sequences identified in the bioinformatic searches of 76 teleost genome assemblies, using zebrafish, medaka, and tetraodon Pxr as query, were aligned with annotated or cloned teleost Pxr (Nr1i1), Vdr (Nr1i2), retinoic acid receptor (RARγ, Nr1b3) and Rev-ERbα(Nr1d1), using Clustal Omega v1.2.2 with default parameters. Due to incomplete sequences in the LBD, Cyttopsis roseus, Neoniphon samara, Lesueurigobius cf., and Holocentrus rupuswas excluded from the alignment.
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2018-05-16
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