Comparison of the performance of HIVcoPred with other methods on subtype D V3 sequences (N = 61), originally used by Huang et al. [54].

SenX4 - Proportion of all viruses that could use X4 and were predicted to be X4-tropic; SenR5 - Proportion of all viruses that only use CCR5 that were predicted to be R5-tropic; SpX4 - correctly predicted CXCR4 usage for all the X4-tropic clones; SpR5X4 - correctly predicted CXCR4 usage for all the dual-tropic clones; ‘N’ is the number of V3 sequences used for this analysis.