S6 Table -

(A) Genes differentially regulated in RxL21 compared to RxL21ΔEAR. Gene descriptions are from Araport 11. Adj.pval indicates significance after limma-voom pipeline and Benjamini Hochberg false discovery rate correction. Log2 fold change (FC) indicates expression in HA:RxL21 lines compared to HA:RxL21ΔEAR lines. Flg22 specific DEGs only show significant differential expression after flg22 induction. Mock / flg22 independent DEGs are DE under mock and/or mock and flg22 conditions. Flg22 (Column H) indicates expression values 120 minutes after flg22 induction from Rallapalli et al. (2014). Comparison is shown to B. cinerea responsive DEGs from Windram et al. (2012) and DEGs during Pst infection (Lewis et al. 2015), including (Column K) description of Pst expression type from Fig 4 (Lewis et al, 2015) where applicable. (B) Details of the genes used for qPCR for RNAseq verification.
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