EMERGE: An interactive online database of quantitative morphological dynamics during Caenorhabditis elegans embryonic development with resolved cell lineage

1. Data.zip — The full EMERGE csv dataset, matching the content available for download at emergedb.com/download. It includes the segmented 3D cell morphology models with their 12 quantitative morphology features per cell, and gene expression data from fluorescence reporter and scRNA-sequencing. 2. Figure.zip — Source code used to generate the figures, including Figure 1, Figure 2, and the Graphical Abstract. 3. Data_processing.zip — The complete data-processing pipeline scripts, covering every step from raw output through segmentation and gene expression quantification, to the final relational database-format tables. 3. Web platform source code — The EMERGE interactive web application is hosted separately on GitHub at https://github.com/PikaPatch/EMERGE.