Additional file 2 of Globins in the marine annelid Platynereis dumerilii shed new light on hemoglobin evolution in bilaterians
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https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Globins_in_the_marine_annelid_Platynereis_dumerilii_shed_new_light_on_hemoglobin_evolution_in_bilaterians/13498013/1
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Additional file 2: Table of the Platynereis globin sequences extracted from transcriptomes, blasted on the Platynereis genome assembly. Sheet 1: the hits for each mRNA sequence are listed in order of decreasing E-Value. Each hit partial sequence was reciprocally blasted on the Platynereis mRNAs and on Genbank for unidentified sequences. Some of the hits correspond to likely distant haplotypes. Others do not correspond to a globin sequence. Sheet 2: the genome assembly was screened with a concatenated Platynereis transcriptome globin probe to detect potential additional genes. The hits are listed by decreasing E-value. Partial hits were reciprocally blasted on Genbank and Platynereis transcriptome. Most high E-value hits correspond to the genes already identified in the transcriptome. A series of low E-value, short sequence globin hits on Genbank were found to code for Platynereis proteins that bear no similarity to globins, indicating that no additional globin gene is present in the assembly.
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figshare
创建时间:
2020-12-29



