The state of Medusozoa genomics: supplementary material

Supplementary Material of the review manuscript entitled "State of Medusozoa genomics: current evidence and future challanges" Supplementary file S1. Dataset 1. Genome report sheet (version 1.2022). This report presents information from public databases, project-based databases, published articles. New releases of this sheet can be published and it can be uploaded upon other author's request.Supplementary file S2. Dataset 2. Command line to retrieve data from NCBI and to generate new results. Presented as html notebooks and plain scripts. Written in bashSupplementary file S3. Dataset 3. Scripts used for graph construction. Presented as html notebooks, jupyter notebooks, and plain scripts. Written in python >3.6Supplementary file S4. Table S1. Species information considering chromosome number, genome size and genomic datasets.Supplementary file S5. Tables S2-8 - All information used for constructing graphs presented in this work. Includes summary information of Figure 2 (table S2), genome resources used in this study (table S3), assembly statistics for Figure 3A (table S4), genome features of Figure 3B (table S5, S6) and BUSCO results for Figure 4 and Supplementary figure S1 (tables S7, S8).Supplementary file S6. Figure S1. BUSCO Eukaryota gene distribution in Medusozoa assemblies. Each column corresponds to a gene and each row an assembly. Information used for this graph is available at Supplementary file S4 Table S8.Supplementary file S7 - Dataset 4. Original metadata from NCBI.Supplementary file S8 - Dataset 5. Original results from AGAT and Galaxy server (BUSCO). Directory structure coincident with directories specified in scripts for graphs.Supplementary file S9 - Dataset 6. Figures in vectorial format