MOESM1 of Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Additional file 1. Table S1. simulated 50 base PE read fusion predictions; Table S2. simulated 101 base PE read predictions; Table S3. known experimentally validated fusions; Table S4. fusion predictions on cancer cell lines; Table S5. Centrifuge-based viral and microbial source predictions for Trinity-assembled transcripts; Table S6. Viral assignments of Trinity-UC assembled transcripts via blastn; Table S7. Fusion prediction software commands; Table S8. sources of RNA-seq data for modeling simulated RNA-seq; Table S9. Cancer cell lines targeted for fusion discovery.