遇见数据集

Grayling draft genome dataset

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Figshare2017-06-22 更新2026-04-29 收录
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资源简介:

###### DescriptionTthymallus_scaffolds.fasta-Assembled scaffold sequencesTthymallus_RepeatLibrary_deNovo.fasta-De novo repeat library sequencesTthymallus_transcriptome_DeNovo.fasta- De novo transcriptome assembly using Trinity (followed by RSEM based filtering)Tthymallus_transcriptome_ReferenceBased.fasta-Reference-based transcriptome using STAR-Cufflinks-transdecoder pipeline (followed by filtering based on homology to known proteins from zebrafish and stickleback proteins.Tthymallus_ScaffoldAnnotation.gff3-MAKER pipeline based annotation for the scaffolds.Tthymallus_proteins.fasta-Grayling protein sequences used for inferring orthologous groups (based on MAKER annotations)Tthymallus_maker_fullOutput.gff- Full output from MAKERTthymallus_CPMcounts.txt-Expression counts for graylingOrthologousGroups.txt-Inferred orthologous groups using Orthofinder

创建时间:
2017-06-22
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